TOPCONS: Consensus prediction of membrane protein topology and signal peptides

Results

Submitted: 2015-02-17 11:38:03
Status: Finished
Wait time in the queue: 0 sec
Running Time: 1 hour

Results of your prediction with jobid: example_56seq

Zipped folder of your result can be found in example_56seq.zip

Dumped prediction in one text file can be found in query.result.txt

The sequence(s) you submitted can be found in query.raw.fa

Total number of protein sequences:	56
TM proteins predicted by the consensus:	27 / 56 (48.2 %)
TM proteins predicted by any of the sub-predictors:	33 / 56 (58.9 %)
Non-TM proteins predicted by the consensus:	29 / 56 (51.8 %)
Non-TM proteins not predicted as TM by any of the sub-predictors:	23 / 56 (41.1 %)
Proteins with signal peptide predicted by the consensus:	4 / 56 (7.1 %)
Proteins with signal peptide predicted by any of the sub-predictors:	4 / 56 (7.1 %)
Please click the link of each sequence below to see the result of individual sequence Note that the table below is sortable by clicking the table header

No.	Length	numTM	SignalPeptide	RunTime(s)	SequenceName	Source	FinishDate
1	360	7	No	173.2	F9VIZ3_ARTSS	newrun	N/A
2	360	7	No	172.9	G2G345_9CLOT	newrun	N/A
3	360	7	No	156.2	G2IA73_9CLOT	newrun	N/A
4	365	7	No	154.2	G2IFU7_9CLOT	newrun	N/A
5	353	7	No	152.0	H7D4B2_9CLOT	newrun	N/A
6	360	7	No	153.5	H7DBI3_9CLOT	newrun	N/A
7	360	7	No	153.2	H7DLF7_9CLOT	newrun	N/A
8	360	7	No	152.2	H7FAJ0_9CLOT	newrun	N/A
9	372	6	No	6.4	A9KQC3_CLOPH/25-396	newrun	N/A
10	336	6	No	166.9	H7DI42_9CLOT	newrun	N/A
11	124	4	No	169.6	E6LP38_9FIRM	newrun	N/A
12	119	4	No	98.2	H1LS29_9FIRM	newrun	N/A
13	124	4	No	88.2	I0R583_9FIRM	newrun	N/A
14	129	2	No	42.1	G9XC52_9FIRM	newrun	N/A
15	220	1	No	41.2	A4IMX2_GEOTN/25-244	newrun	N/A
16	244	1	No	35.6	B4BKI5_9BACI	newrun	N/A
17	398	1	No	5.1	C2E3Q1_LACJH	newrun	N/A
18	268	0	No	51.8	C4FQH6_9FIRM	newrun	N/A
19	249	1	No	44.8	C9S181_GEOSY	newrun	N/A
20	398	1	No	3.7	D0R246_LACJF	newrun	N/A
21	249	1	No	36.2	D7D7U8_GEOSC	newrun	N/A
22	358	1	No	56.2	D7V5T8_LACGS	newrun	N/A
23	249	1	No	37.3	E8T1B4_GEOS2	newrun	N/A
24	398	1	No	3.7	F4ADL2_LACJH	newrun	N/A
25	398	1	No	3.0	F7SGH3_LACJH	newrun	N/A
26	249	1	No	35.8	G8N3W7_GEOTH	newrun	N/A
27	307	0	Yes	52.8	H1DCJ4_9FUSO	newrun	N/A
28	249	1	No	35.9	Q5L007_GEOKA	newrun	N/A
29	398	1	No	2.9	Q74LR0_LACJO	newrun	N/A
30	267	0	No	4.9	C6JJN8_FUSVA	newrun	N/A
31	178	0	No	36.1	C7XRP9_FUSNV	newrun	N/A
32	242	0	No	50.2	C8UR85_ECO1A	newrun	N/A
33	324	0	No	51.7	D1YKR7_LACGS	newrun	N/A
34	150	0	No	29.6	D3HA47_STRM6	newrun	N/A
35	236	0	No	43.8	D3RB11_KLEVT	newrun	N/A
36	372	0	Yes	58.4	D4CST2_9FUSO	newrun	N/A
37	374	0	Yes	90.7	D6LID3_9FUSO	newrun	N/A
38	242	0	No	83.0	E3XGR8_ECOLX	newrun	N/A
39	226	0	No	59.6	E7INC2_ECOLX	newrun	N/A
40	242	0	No	49.4	G0FH81_ECOLX	newrun	N/A
41	242	0	No	41.3	G1YMY8_ECOLX	newrun	N/A
42	210	0	No	47.1	G7LMW6_9ENTR	newrun	N/A
43	202	0	No	4.6	G9X3A8_9FIRM	newrun	N/A
44	241	0	No	42.0	H0NF89_SALET	newrun	N/A
45	391	0	No	63.0	H1CB13_9FIRM	newrun	N/A
46	233	0	No	46.4	H4IS68_ECOLX	newrun	N/A
47	241	0	No	39.0	H4KHF1_ECOLX	newrun	N/A
48	227	0	No	43.1	H4UU15_ECOLX	newrun	N/A
49	242	0	No	41.6	H4Z7Q1_ECOLX	newrun	N/A
50	242	0	No	40.6	H4ZT15_ECOLX	newrun	N/A
51	226	0	No	39.0	H4ZY33_ECOLX	newrun	N/A
52	226	0	No	39.9	H5D6P4_ECOLX	newrun	N/A
53	242	0	No	40.0	H5J4Y5_ECOLX	newrun	N/A
54	147	0	No	31.5	H6MME4_ECOLX	newrun	N/A
55	372	0	Yes	54.2	Q47913_9FUSO	newrun	N/A
56	309	0	No	47.2	Q71T76_BPP1	newrun	N/A