Results
- Submitted: 2015-02-09 13:53:19
- Status: Finished
- Wait time in the queue: 0 sec
- Running Time: 3 secs
Results of your prediction with jobid: example_1seq
Zipped folder of your result can be found in
example_1seq.zip
Dumped prediction in one text file can be found in
query.result.txt
The sequence(s) you submitted can be found in
query.raw.fa
Predicted topologies and predicted ΔG values:
Consensus prediction (TOPCONS):
Predicted signal peptide and TM-helix positions (position starting from 1):
| TOPCONS |
TM1: 18-38, |
TM2: 50-70, |
TM3: 90-110, |
TM4: 116-136, |
TM5: 143-163, |
TM6: 180-200, |
TM7: 213-233 |
| OCTOPUS |
TM1: 18-38, |
TM2: 50-70, |
TM3: 90-110, |
TM4: 116-136, |
TM5: 143-163, |
TM6: 180-200, |
TM7: 211-231 |
| Philius |
TM1: 18-37, |
TM2: 50-72, |
TM3: 90-108, |
TM4: 116-136, |
TM5: 143-164, |
TM6: 182-201, |
TM7: 214-233 |
| PolyPhobius |
TM1: 19-38, |
TM2: 50-72, |
TM3: 91-109, |
TM4: 116-137, |
TM5: 143-162, |
TM6: 182-200, |
TM7: 214-233 |
| SCAMPI |
TM1: 17-37, |
TM2: 50-70, |
TM3: 89-109, |
TM4: 116-136, |
TM5: 141-161, |
TM6: 179-199, |
TM7: 214-234 |
| SPOCTOPUS |
TM1: 18-38, |
TM2: 50-70, |
TM3: 90-110, |
TM4: 116-136, |
TM5: 143-163, |
TM6: 180-200, |
TM7: 211-231 |
| PDB-homology |
***No homologous TM proteins detected*** |
Sequence and predicted topologies:
(i: inside the membrane, o: outside of the membrane, M: membrane region, u: non-membrane region but location unkown)
| | 1 41 | | Seq. | MCCAALAPPM AATVGPESIW LWIGTIGMTL GTLYFVGRGR GVRDRKMQEF |
| TOPCONS | oooooooooo oooooooMMM MMMMMMMMMM MMMMMMMMii iiiiiiiiiM |
| OCTOPUS | oooooooooo oooooooMMM MMMMMMMMMM MMMMMMMMii iiiiiiiiiM |
| PHILIUS | oooooooooo oooooooMMM MMMMMMMMMM MMMMMMMiii iiiiiiiiiM |
| PolyPhobius | oooooooooo ooooooooMM MMMMMMMMMM MMMMMMMMii iiiiiiiiiM |
| SCAMPI | oooooooooo ooooooMMMM MMMMMMMMMM MMMMMMMiii iiiiiiiiiM |
| SPOCTOPUS | oooooooooo oooooooMMM MMMMMMMMMM MMMMMMMMii iiiiiiiiiM |
| |
| | 51 91 | | Seq. | YIITIFITTI AAAMYFAMAT GFGVTEVMVG DEALTIYWAR YADWLFTTPL |
| TOPCONS | MMMMMMMMMM MMMMMMMMMM oooooooooo oooooooooM MMMMMMMMMM |
| OCTOPUS | MMMMMMMMMM MMMMMMMMMM oooooooooo oooooooooM MMMMMMMMMM |
| PHILIUS | MMMMMMMMMM MMMMMMMMMM MMoooooooo oooooooooM MMMMMMMMMM |
| PolyPhobius | MMMMMMMMMM MMMMMMMMMM MMoooooooo oooooooooo MMMMMMMMMM |
| SCAMPI | MMMMMMMMMM MMMMMMMMMM oooooooooo ooooooooMM MMMMMMMMMM |
| SPOCTOPUS | MMMMMMMMMM MMMMMMMMMM oooooooooo oooooooooM MMMMMMMMMM |
| |
| | 101 141 | | Seq. | LLLDLSLLAG ANRNTIATLI GLDVFMIGTG AIAALSSTPG TRIAWWAIST |
| TOPCONS | MMMMMMMMMM iiiiiMMMMM MMMMMMMMMM MMMMMMoooo ooMMMMMMMM |
| OCTOPUS | MMMMMMMMMM iiiiiMMMMM MMMMMMMMMM MMMMMMoooo ooMMMMMMMM |
| PHILIUS | MMMMMMMMii iiiiiMMMMM MMMMMMMMMM MMMMMMoooo ooMMMMMMMM |
| PolyPhobius | MMMMMMMMMi iiiiiMMMMM MMMMMMMMMM MMMMMMMooo ooMMMMMMMM |
| SCAMPI | MMMMMMMMMi iiiiiMMMMM MMMMMMMMMM MMMMMMoooo MMMMMMMMMM |
| SPOCTOPUS | MMMMMMMMMM iiiiiMMMMM MMMMMMMMMM MMMMMMoooo ooMMMMMMMM |
| |
| | 151 191 | | Seq. | GALLALLYVL VGTLSENARN RAPEVASLFG RLRNLVIALW FLYPVVWILG |
| TOPCONS | MMMMMMMMMM MMMiiiiiii iiiiiiiiiM MMMMMMMMMM MMMMMMMMMM |
| OCTOPUS | MMMMMMMMMM MMMiiiiiii iiiiiiiiiM MMMMMMMMMM MMMMMMMMMM |
| PHILIUS | MMMMMMMMMM MMMMiiiiii iiiiiiiiii iMMMMMMMMM MMMMMMMMMM |
| PolyPhobius | MMMMMMMMMM MMiiiiiiii iiiiiiiiii iMMMMMMMMM MMMMMMMMMM |
| SCAMPI | MMMMMMMMMM Miiiiiiiii iiiiiiiiMM MMMMMMMMMM MMMMMMMMMo |
| SPOCTOPUS | MMMMMMMMMM MMMiiiiiii iiiiiiiiiM MMMMMMMMMM MMMMMMMMMM |
| |
| | 201 241 | | Seq. | TEGTFGILPL YWETAAFMVL DLSAKVGFGV ILLQSRSVLE RVATPTAAPT |
| TOPCONS | oooooooooo ooMMMMMMMM MMMMMMMMMM MMMiiiiiii iiiiiiiiii |
| OCTOPUS | oooooooooo MMMMMMMMMM MMMMMMMMMM Miiiiiiiii iiiiiiiiii |
| PHILIUS | Mooooooooo oooMMMMMMM MMMMMMMMMM MMMiiiiiii iiiiiiiiii |
| PolyPhobius | oooooooooo oooMMMMMMM MMMMMMMMMM MMMiiiiiii iiiiiiiiii |
| SCAMPI | oooooooooo oooMMMMMMM MMMMMMMMMM MMMMiiiiii iiiiiiiiii |
| SPOCTOPUS | oooooooooo MMMMMMMMMM MMMMMMMMMM Miiiiiiiii iiiiiiiiii |
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